Function reference • STADEM

All functions
`addTrapRate()`	Combine fish and trap rate data
`compileGRAdata()`	STADEM Data Summary
`extractPost()`	Extract STADEM Posteriors
`getWindowCounts()`	Compile Window Counts
`jagsInits()`	Initial values
`plotTimeSeries()`	Time Series Plot
`prepJAGS()`	Compile JAGS data
`queryLGRtrapDatabase()`	Access Lower Granite Dam trap database
`queryPITtagData()`	PIT tag data
`queryPITtagObs()`	PIT tag data
`queryTrapRate()`	DART reported trap rate
`queryWindowCnts()`	DART Window Counts
`readLGRtrapDB()`	LGR Trap Database
`runSTADEMmodel()`	Run JAGS model
`STADEMtoSCBOI()`	Summarise STADEM output for SCOBI
`summariseLGRtrapDaily()`	Summarise LGR Trap Database
`summariseLGRweekly()`	Compile weekly data for Lower Granite dam
`summarisePITdataDaily()`	Summarise PIT tag data
`tagTrapRate()`	PIT tag based trap rate
`weeklyStrata()`	Generate weekly strata
`writeJAGSmodel()`	Write JAGS model

Reference