Writing JAGS ModelFunctions for writing and updating the JAGS .txt model file |
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Write DABOM JAGS model |
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Modify basic JAGS model |
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JAGS InputsFunctions to prepare JAGS Inputs |
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DABOM Initial Values |
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Prep DABOM JAGS inputs |
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Add Time-Varying Data |
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Set Saved Parameters |
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Summarizing ResultsFunctions related to summarizing detection, movement and escapement estimates |
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Extract Detection Posteriors |
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Extract Transition Posteriors |
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Compile Transition Probabilities |
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Summarise Detection Probabilities |
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Summarize Posteriorrs |
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Calculate Abundance Posteriors |
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Internal FunctionsThese functions are used internally, within other functions |
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Prep DABOM capture histories |
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Create Dirichlet vector |
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Node List |
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Define Column Names for DABOM matrix |
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Estimate Mode of Posterior Distribution |
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Set Branch Numbers |